Tag Archives: ANU

immune system

Discovery helps researchers better understand immune system

A team from The Australian National University (ANU) and Monash University found the immune system can recognise more proteins from viruses and vaccines than previously thought.

“More than 80 per cent of the virus proteins can be recognised by the immune system and used to trigger an immune reaction by the body. This is much more than was expected”, said senior author Professor David Tscharke from the John Curtin School of Medical Research at ANU.

immune system

Professor David Tscharke. (Image credit: Jamie Kidston, ANU)

“This work has unearthed a better understanding of how well viruses and vaccines are recognised by the body.”

Lead author Dr Nathan Croft, from the Monash Biomedicine Discovery Institute (BDI), said the findings will have practical outcomes for new vaccines.

“We can now begin to apply this knowledge to other viruses and to cancer, to pinpoint favourable targets for the immune system,” said Dr Croft.

The team used vaccinia virus to understand how much of a virus is actually recognised and targeted by the immune system.

Vaccinia virus was used as a vaccine to eradicate smallpox and is now repurposed as a tool against other viruses as well as cancers.

“This is a remarkable finding that highlights the power of mass spectrometry to identify the entirety of viral antigens that are exposed to the immune system,” said co-senior author, Professor Anthony Purcell from Monash BDI.

“The translation to human infectious disease is obvious, but the identification of tumor derived antigens is also an exciting area we are developing to drive the precision oncology field and cancer immunotherapy.”

“Our results also show that no part of the virus is hidden from the immune system, no matter what time these parts are produced or how they are used by the virus,” said Professor Tscharke.

The team used a combination of biochemistry, bioinformatics and statistics to identify viral peptides present on the surface of infected cells and analyse the ability of the immune system to see them as foreign targets.

The research, supported by the National Health and Medical Research Council (NHMRC) and the Australian Research Council (ARC) is published in the Proceedings of the National Academy of Sciences (PNAS).

This article was originally published by ANU.

climate tech

Future tech for a stable climate

Humans have emitted 1,540 billion tonnes of carbon dioxide gas since the industrial revolution. Credit: REUTERS/Tim Wimborne

Getting climate change under control is a formidable, multifaceted challenge. Analysis by my colleagues and me suggests that staying within safe warming levels now requires removing carbon dioxide from the atmosphere, as well as reducing greenhouse gas emissions.

The technology to do this is in its infancy and will take years, even decades, to develop, but our analysis suggests that this must be a priority. If pushed, operational large-scale systems should be available by 2050.

We created a simple climate model and looked at the implications of different levels of carbon in the ocean and the atmosphere. This lets us make projections about greenhouse warming, and see what we need to do to limit global warming to within 1.5℃ of pre-industrial temperatures – one of the ambitions of the 2015 Paris climate agreement.

To put the problem in perspective, here are some of the key numbers.

Humans have emitted 1,540 billion tonnes of carbon dioxide gas since the industrial revolution. To put it another way, that’s equivalent to burning enough coal to form a square tower 22 metres wide that reaches from Earth to the Moon.

Half of these emissions have remained in the atmosphere, causing a rise of CO₂ levels that is at least 10 times faster than any known natural increase during Earth’s long history. Most of the other half has dissolved into the ocean, causing acidification with its own detrimental impacts.

Although nature does remove CO₂, for example through growth and burial of plants and algae, we emit it at least 100 times faster than it’s eliminated. We can’t rely on natural mechanisms to handle this problem: people will need to help as well.

What’s the goal?

The Paris climate agreement aims to limit global warming to well below 2℃, and ideally no higher than 1.5℃. (Others say that 1℃ is what we should be really aiming for, although the world is already reaching and breaching this milestone.)

In our research, we considered 1℃ a better safe warming limit because any more would take us into the territory of the Eemian period, 125,000 years ago. For natural reasons, during this era the Earth warmed by a little more than 1℃. Looking back, we can see the catastrophic consequences of global temperatures staying this high over an extended period.

Sea levels during the Eemian period were up to 10 metres higher than present levels. Today, the zone within 10m of sea level is home to 10% of the world’s population, and even a 2m sea-level rise today would displace almost 200 million people.

Clearly, pushing towards an Eemian-like climate is not safe. In fact, with 2016 having been 1.2℃ warmer than the pre-industrial average, and extra warming locked in thanks to heat storage in the oceans, we may already have crossed the 1℃ average threshold. To keep warming below the 1.5℃ goal of the Paris agreement, it’s vital that we remove CO₂ from the atmosphere as well as limiting the amount we put in.

So how much CO₂ do we need to remove to prevent global disaster?

Credit: International energy agency

Are you a pessimist or an optimist?

Currently, humanity’s net emissions amount to roughly 37 gigatonnes of CO₂ per year, which represents 10 gigatonnes of carbon burned (a gigatonne is a billion tonnes). We need to reduce this drastically. But even with strong emissions reductions, enough carbon will remain in the atmosphere to cause unsafe warming.

Using these facts, we identified two rough scenarios for the future.

The first scenario is pessimistic. It has CO₂ emissions remaining stable after 2020. To keep warming within safe limits, we then need to remove almost 700 gigatonnes of carbon from the atmosphere and ocean, which freely exchange CO₂. To start, reforestation and improved land use can lock up to 100 gigatonnes away into trees and soils. This leaves a further 600 gigatonnes to be extracted via technological means by 2100.

Technological extraction currently costs at least US$150 per tonne. At this price, over the rest of the century, the cost would add up to US$90 trillion. This is similar in scale to current global military spending, which – if it holds steady at around US$1.6 trillion a year – will add up to roughly US$132 trillion over the same period.

The second scenario is optimistic. It assumes that we reduce emissions by 6% each year starting in 2020. We then still need to remove about 150 gigatonnes of carbon.

As before, reforestation and improved land use can account for 100 gigatonnes, leaving 50 gigatonnes to be technologically extracted by 2100. The cost for that would be US$7.5 trillion by 2100 – only 6% of the global military spend.

Of course, these numbers are a rough guide. But they do illustrate the crossroads at which we find ourselves.

The job to be done

Right now is the time to choose: without action, we’ll be locked into the pessimistic scenario within a decade. Nothing can justify burdening future generations with this enormous cost.

For success in either scenario, we need to do more than develop new technology. We also need new international legal, policy, and ethical frameworks to deal with its widespread use, including the inevitable environmental impacts.

Releasing large amounts of iron or mineral dust into the oceans could remove CO₂ by changing environmental chemistry and ecology. But doing so requires revision of international legal structures that currently forbid such activities.

Similarly, certain minerals can help remove CO₂ by increasing the weathering of rocks and enriching soils. But large-scale mining for such minerals will impact on landscapes and communities, which also requires legal and regulatory revisions.

And finally, direct CO₂ capture from the air relies on industrial-scale installations, with their own environmental and social repercussions.

Without new legal, policy, and ethical frameworks, no significant advances will be possible, no matter how great the technological developments. Progressive nations may forge ahead toward delivering the combined package.

The costs of this are high. But countries that take the lead stand to gain technology, jobs, energy independence, better health, and international gravitas.

– Eelco Rohling, professor of ocean and climate change at the Australian National University (ANU)

This article was first published by the World Economic Forum and The Conversation. Read the original article here.

collaboration platform

Collaboration platform welcomes universities

The Australian National University and the University of Western Australia have become the first research institutions in Australasia to join IN-PART, a global university-industry collaboration platform.

Researchers at these universities will have access to a growing community of 2000+ R&D professionals from over 600 businesses in Europe, Oceania, the UK, and the USA, who use IN-PART to collaborate with universities in the commercialisation of academic research.

“The potential of the output from world leading research at Australian institutions is huge, but the limited industrial base means that it is essential we partner with corporate world leaders to realise that potential”, said Professor Michael Cardew-Hall, Pro Vice-Chancellor of Innovation at The Australian National University.

“The ANU has strong links with many partner research institutions worldwide and strategic partnerships with major corporations. However, developing new partnerships that are mutually beneficial is a key strategy for the University”.

The Australian National University (ANU) and the University of Western Australia (UWA) will join 70 universities from the UK, USA, Japan, and Europe — including Cambridge, Cornell, and King’s College London — who currently use IN-PART to publish innovation and expertise from academics who are actively looking to interact with industry.

“We’re very excited about being able to profile our projects to targeted people in relevant industries, and to show people that UWA and Australia are the home of some amazing innovations. Just as our researchers rely on collaborating locally and internationally, tech transfer offices need to look further afield for development partners with particular expertise and routes to market”, said Simon Handford, Associate Director of Innovation at the University of Western Australia.

“Hopefully, IN-PART can help us meet future R&D partners and give more projects the chance of being translated into something that can be put to use”.

Launched in January 2014, IN-PART has facilitated the first point of contact for a range of university-industry collaborations that include licensing deals, co-development projects with joint funding, academic secondments, and long-term research partnerships.

This information was first shared by IN-PART on 11 August 2016.